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Tools

Explore tools developed by and/or used in VHP4Safety.

You can search for a tool that you know using the search box below. Alternatively, you can filter the tools with respect to the case studies' flow step that they belong to and/or the regulatory question that they are associated with. Use the "Filters" button to show filter options, then "OK" to see results, and click "X" to reset the filters.

Contribution and Feedback

We welcome and appreciate any feedback on this catalog of tools or the individual tools listed in it. We also appreciate receiving requests for other tools that you are aware of and deem relevant to this catalog. For these contribution and feedback, please feel free to create an issue at our repository.

Developed by VHP Hosted by VHP
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    Llemy Developed by VHP

    An online tool for answering questions about lipid metabolism and related toxicology/biology using MINERVA pathway knowledge, live web research and AI-generated summaries.

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    MCT8 Docking for MIE Discovery Developed by VHP Hosted by VHP

    A Jupyter notebook (and Flask web application) for predicting binding affinity of compounds to the MCT8 (SLC16A2) thyroid-hormone transporter using neural-network–enhanced molecular docking (Gnina), to flag candidate Molecular Initiating Events in the developmental thyroid-toxicity case study.

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    MolAOP analyser Developed by VHP Hosted by VHP

    A web application for Key Event enrichment analysis on transcriptomic data in the context of molecular AOPs, with Fisher's exact and GSEA tests (FDR-corrected), interactive volcano plots, batch comparisons across conditions, and Cytoscape-based AOP network visualization with gene-expression overlays.

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    Molecular AOP Builder Developed by VHP Hosted by VHP

    A curator-in-the-loop web application that maps AOP Key Events to WikiPathways pathways, Gene Ontology biological-process terms, and Reactome pathways using BioBERT semantic similarity, with gene-overlap context and an admin review workflow before mappings enter the public REST API.

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    NIH Dietary Supplement Label Database

    An online database from the NIH Office of Dietary Supplements that lets you explore information from more than 200,000 dietary supplement labels sold in the United States.

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    O-QT — OECD QSAR Toolbox AI Assistant Developed by VHP

    An online assistant for using the OECD QSAR Toolbox to analyze chemicals, assess hazards and generate AI-based summary reports.

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